publications

publications by categories in reversed chronological order. generated by jekyll-scholar.

2024

  1. Olfactory system structure and function in newly hatched and adult locusts
    Kui Sun, Subhasis Ray, Nitin Gupta, Zane Aldworth, and Mark Stopfer
    Scientific Reports, Jan 2024

2023

  1. Innate attraction and aversion to odors in locusts
    Subhasis Ray, Kui Sun, and Mark Stopfer
    PLOS One, Jul 2023

2022

  1. Anubhutir Bahir O Bhitar
    Subhasis Ray
    In Pran Pelo Prithibi, A Collection of Essays, Jul 2022

2021

  1. Argos: a toolkit for tracking multiple animals in complex visual environments
    Subhasis Ray, and Mark Stopfer
    Methods in Ecology and Evolution, Jul 2021

2020

  1. Feedback inhibition and its control in an insect olfactory circuit
    Subhasis Ray, Zane N Aldworth, and Mark A Stopfer
    ELife, Jul 2020

2016

  1. NSDF: neuroscience simulation data format
    Subhasis Ray, Chaitanya Chintaluri, Upinder S Bhalla, and Daniel K Wójcik
    Neuroinformatics, Jul 2016

2014

  1. Neuroscience Simulation Data Format (NSDF): HDF-based format for large simulation datasets
    Hanuma Chaitanya Chintaluri, Subhasis Ray, Upinder S Bhalla, and Daniel K Wójcik
    Frontiers in Neuroinformatics, Jul 2014
  2. MOOSE, the Multiscale Object-Oriented Simulation Environment.
    Niraj Dudani, Upinder S Bhalla, and Subhasis Ray
    Jul 2014
  3. Multiscale Modeling in MOOSE: Interfaces, Interoperability and Standards
    S Ray, N Dudani, H Chintaluri, G Harsharani, and U Bhalla
    In Front. Neuroinform. Conference Abstract: 5th INCF Congress of Neuroinformatics. doi: 10.3389/conf. fninf, Jul 2014

2012

  1. Computational Neuroscience Ontology: a new tool to provide semantic meaning to your models
    Yann Le Franc, Andrew P Davison, Padraig Gleeson, Fahim T Imam, Birgit Kriener, Stephen D Larson, Subhasis Ray, Lars Schwabe, Sean Hill, and Erik De Schutter
    BMC Neuroscience, Jul 2012

2011

  1. NineML: the network interchange for ne uroscience modeling language
    Ivan Raikov, Robert Cannon, Robert Clewley, Hugo Cornelis, Andrew Davison, Erik De Schutter, Mikael Djurfeldt, Padraig Gleeson, Anatoli Gorchetchnikov, Hans Ekkehard Plesser, and  others
    BMC neuroscience, Jul 2011
  2. Multiscale models in MOOSE: interoperability and standardization
    Upinder Bhalla, Subhasis Ray, Niraj Dudani, Siji George, Aditya Gilra, and G Harsharani
    In Conference Abstract: 4th INCF Congress of Neuroinformatics. doi: 10.3389/conf. fninf, Jul 2011
  3. NineML: declarative, mathematically-explicit descriptions of spiking neuronal networks
    A Gorchetchnikov, R Cannon, R Clewley, H Cornelis, A Davison, E De Schutter, M Djurfeldt, P Gleeson, S Hill, M Hines, and  others
    In Frontiers in Neuroinform. Conference Abstract: 4th INCF Congress of Neuroinformatics, Jul 2011

2010

  1. NeuroML: a language for describing data driven models of neurons and networks with a high degree of biological detail
    Padraig Gleeson, Sharon Crook, Robert C Cannon, Michael L Hines, Guy O Billings, Matteo Farinella, Thomas M Morse, Andrew P Davison, Subhasis Ray, Upinder S Bhalla, and  others
    PLoS computational biology, Jul 2010

2009

  1. Multiscale modeling and interoperability in MOOSE
    Niraj Dudani, Subhasis Ray, Siji George, and Upinder S Bhalla
    BMC Neuroscience, Jul 2009

2008

  1. PyMOOSE: interoperable scripting in Python for MOOSE
    Subhasis Ray, and Upinder S Bhalla
    Frontiers in neuroinformatics, Jul 2008
  2. A general biological simulator: the multiscale object oriented simulation environment, MOOSE
    Subhasis Ray, Raamesh Deshpande, Niraj Dudani, and Upinder S Bhalla
    BMC Neuroscience, Jul 2008
  3. Large-scale synapse-level neuronal wiring diagrams in silico and in vitro
    Upinder S Bhalla, Radhika Madhavan, Ashesh Dhawale, Mehrab Modi, Raamesh Deshpande, Niraj Dudani, and Subhasis Ray
    BMC Neuroscience, Jul 2008